Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919450.1_cds_XP_016468660.1_61273
CDS Infomation

[gene=LOC107791163] [db_xref=GeneID:107791163] [protein=histone-lysine N-methyltransferase ASHR3-like isoform X2] [protein_id=XP_016468660.1] [location=join(31664..31966,34745..34891,35387..35551,38100..38217,38326..38422,39043..39136,39260..39338,43450..43621,44500..44580,45071..45239)] [gbkey=CDS]
Sequence

ATGGTTTTAAAAATGCCTGATTTTGGCAATCTTTTGGACCCAAATATTGAAATTTCAAGT
GAATCAGATAGCCAAATCCAGGCTCTTGTTGTTTCTGACCCAAATACCCAAATGGGGTTC
CCTATTTTGCATAAAGAAGATGAATTGAAACTTGAAAATAGGGGTTTGAGGCAGTATGGT
GGTGGGTCAGTGGCGAAAAAGAGTTTGGATGATTATGTTAAAGATTGGGTTCAGAGGAAA
GTCAATGCTGGTGTTGATAAAAACAATTGTTTCTTGCCATTCCTTGTTCATGCTCCTAAA
TTGGTTGAGTGCTCTGTTTGCCAAAGATTAATTTTTCCTGGTGAGAAGGTAGGATGCTCT
GTTCGAGATTGTACGGGAGTTTTCCACTTAAAATGTGCAAAAGAAAGACTTGGGTTATCT
TCTCCCAAAACATTTAAGTGCCCTCAGCATGTATGTTATGTTTGTAATAAAAAGATACAT
CTCTGGCGGTGCATCAGATGTCCACTAGCATCACACGATAAGTGTGCAGCATTTCCAGAG
CACGTGGTTCATTTGAATGATCAGCCAGGGCGAGTAATTTGTTGGAAGCATTCTGCCGAT
TGGCATTTGGAGAAGGAGATATTCAATCATTTGCCTTTACCATACATGGAGGAGGAGTTC
AAGATTGACATAAATTGGAAAGACATGATTGAAAACAGATTTGAACCACCACCATACGTG
CATATCAAGAGAAATGTCTACCTCATTAAGAAAAAACGTGATGGCATTAATGCTGATATT
GGGTGCACAAACTGCAGATCTACAGAATGTTCGGACAATTGTGTTTGCAGGGTTCAATGC
ATAAGTTGTTCGAAGGCGTGCCGTTGCTCTGATATGTGCTCAAACAGACCTTTTCGGAGA
GAGAAAAAGATAAAAGTTGTCAAGACAGAACTTTGTGGTTGGGGGGTAGTAGCAGCTGAA
TCCATAAAGAAAGGTGACTTCATAATTGAGTACATCGGTGAAGTTATTGATGATGCCTTG
TGCGAGAAAAGGCTGTGGGATATGAAATATAAAGGAGTGAAAAATTTCTACATGTGTGAA
TTACGGAAAGATTTCACAATTGATGCAACGTTCAAAGGAAACTTGTCTCGCTTTCTCAAC
CATAGCTGTGATCCTAATTGCAAACTGGAAAAATGGCAGGTTGAAGGTGAGACTCGAGTT
GGTGTCTTTGCTGCTCAATCCATTGAAGTAGGAGAACCTCTGACCTATGATTACAGATTT
GTGCAGTTTGGACCAGAAGTAAAGTGCAATTGTGGAGCTTCAAATTGTCAAGGCTATCTG
GGTAGCAAAAAGAAAATTGTGACTACACTGGACATCTGTTGGGGTACGAAACGCAGGAGA
ACATCTACGTCTTGCCTAGCGATCATTAAATTGAATACGTGTTAG

Peptide Sequence

PEP ID

XP_016468660.1
PEP Infomation

PREDICTED: histone-lysine N-methyltransferase ASHR3-like isoform X2 [Nicotiana tabacum]
Sequence

MVLKMPDFGNLLDPNIEISSESDSQIQALVVSDPNTQMGFPILHKEDELKLENRGLRQYG
GGSVAKKSLDDYVKDWVQRKVNAGVDKNNCFLPFLVHAPKLVECSVCQRLIFPGEKVGCS
VRDCTGVFHLKCAKERLGLSSPKTFKCPQHVCYVCNKKIHLWRCIRCPLASHDKCAAFPE
HVVHLNDQPGRVICWKHSADWHLEKEIFNHLPLPYMEEEFKIDINWKDMIENRFEPPPYV
HIKRNVYLIKKKRDGINADIGCTNCRSTECSDNCVCRVQCISCSKACRCSDMCSNRPFRR
EKKIKVVKTELCGWGVVAAESIKKGDFIIEYIGEVIDDALCEKRLWDMKYKGVKNFYMCE
LRKDFTIDATFKGNLSRFLNHSCDPNCKLEKWQVEGETRVGVFAAQSIEVGEPLTYDYRF
VQFGPEVKCNCGASNCQGYLGSKKKIVTTLDICWGTKRRRTSTSCLAIIKLNTC

Transcript Sequence

Gene sequence data has not been registered.